[INFO] fetching crate openmm-sys 7.4.1...
[INFO] checking openmm-sys-7.4.1 against master#cfbc6d4cf1acbac5c025acf8ed68929caa551df3 for pr-75494-beta
[INFO] extracting crate openmm-sys 7.4.1 into /workspace/builds/worker-3/source
[INFO] validating manifest of crates.io crate openmm-sys 7.4.1 on toolchain cfbc6d4cf1acbac5c025acf8ed68929caa551df3
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+cfbc6d4cf1acbac5c025acf8ed68929caa551df3" "read-manifest" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] started tweaking crates.io crate openmm-sys 7.4.1
[INFO] finished tweaking crates.io crate openmm-sys 7.4.1
[INFO] tweaked toml for crates.io crate openmm-sys 7.4.1 written to /workspace/builds/worker-3/source/Cargo.toml
[INFO] crate crates.io crate openmm-sys 7.4.1 already has a lockfile, it will not be regenerated
[INFO] running `Command { std: "/workspace/cargo-home/bin/cargo" "+cfbc6d4cf1acbac5c025acf8ed68929caa551df3" "fetch" "--locked" "--manifest-path" "Cargo.toml", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+cfbc6d4cf1acbac5c025acf8ed68929caa551df3" "metadata" "--no-deps" "--format-version=1", kill_on_drop: false }`
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] [stdout] 08fae7dd23dd21190155fe38293972dffc88d22a41d7fa6d04b8da73edc17537
[INFO] running `Command { std: "docker" "start" "-a" "08fae7dd23dd21190155fe38293972dffc88d22a41d7fa6d04b8da73edc17537", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "inspect" "08fae7dd23dd21190155fe38293972dffc88d22a41d7fa6d04b8da73edc17537", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "08fae7dd23dd21190155fe38293972dffc88d22a41d7fa6d04b8da73edc17537", kill_on_drop: false }`
[INFO] [stdout] 08fae7dd23dd21190155fe38293972dffc88d22a41d7fa6d04b8da73edc17537
[INFO] running `Command { std: "docker" "create" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/target:/opt/rustwide/target:rw,Z" "-v" "/var/lib/crater-agent-workspace/builds/worker-3/source:/opt/rustwide/workdir:ro,Z" "-v" "/var/lib/crater-agent-workspace/cargo-home:/opt/rustwide/cargo-home:ro,Z" "-v" "/var/lib/crater-agent-workspace/rustup-home:/opt/rustwide/rustup-home:ro,Z" "-e" "SOURCE_DIR=/opt/rustwide/workdir" "-e" "CARGO_TARGET_DIR=/opt/rustwide/target" "-e" "CARGO_INCREMENTAL=0" "-e" "RUST_BACKTRACE=full" "-e" "RUSTFLAGS=--cap-lints=forbid" "-e" "CARGO_HOME=/opt/rustwide/cargo-home" "-e" "RUSTUP_HOME=/opt/rustwide/rustup-home" "-w" "/opt/rustwide/workdir" "-m" "1610612736" "--user" "0:0" "--network" "none" "rustops/crates-build-env@sha256:a636fd89d022f18117e1dc8fb37a0a009933cdbbe082814857f0e2024962d47c" "/opt/rustwide/cargo-home/bin/cargo" "+cfbc6d4cf1acbac5c025acf8ed68929caa551df3" "check" "--frozen" "--all" "--all-targets" "--message-format=json", kill_on_drop: false }`
[INFO] [stdout] a38b06bc223c26c0535ad3b499c49994c41800932220a30e491d0763a7807155
[INFO] [stderr] WARNING: Your kernel does not support swap limit capabilities or the cgroup is not mounted. Memory limited without swap.
[INFO] running `Command { std: "docker" "start" "-a" "a38b06bc223c26c0535ad3b499c49994c41800932220a30e491d0763a7807155", kill_on_drop: false }`
[INFO] [stderr]    Compiling cc v1.0.59
[INFO] [stderr]    Compiling cmake v0.1.44
[INFO] [stderr]    Compiling openmm-sys v7.4.1 (/opt/rustwide/workdir)
[INFO] [stderr] The following warnings were emitted during compilation:
[INFO] [stderr] 
[INFO] [stderr] warning: [OpenMM-sys] Dynamically linking against the OpenMM library.
[INFO] [stderr] 
[INFO] [stderr] error: failed to run custom build command for `openmm-sys v7.4.1 (/opt/rustwide/workdir)`
[INFO] [stderr] 
[INFO] [stderr] Caused by:
[INFO] [stderr]   process didn't exit successfully: `/opt/rustwide/target/debug/build/openmm-sys-3fd9870336159f07/build-script-build` (exit code: 101)
[INFO] [stderr]   --- stdout
[INFO] [stderr]   cargo:warning=[OpenMM-sys] Dynamically linking against the OpenMM library.
[INFO] [stderr]   running: "cmake" "/opt/rustwide/workdir/openmm" "-DOPENMM_BUILD_PYTHON_WRAPPERS=OFF" "-DCMAKE_INSTALL_PREFIX=/opt/rustwide/target/debug/build/openmm-sys-da2de88865722704/out" "-DCMAKE_C_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_C_COMPILER=/usr/bin/cc" "-DCMAKE_CXX_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_CXX_COMPILER=/usr/bin/c++" "-DCMAKE_ASM_FLAGS= -ffunction-sections -fdata-sections -fPIC -m64" "-DCMAKE_ASM_COMPILER=/usr/bin/cc" "-DCMAKE_BUILD_TYPE=Release"
[INFO] [stderr]   -- Found PythonInterp: /usr/bin/python (found version "2.7.18") 
[INFO] [stderr]   -- The C compiler identification is GNU 9.3.0
[INFO] [stderr]   -- The CXX compiler identification is GNU 9.3.0
[INFO] [stderr]   -- Check for working C compiler: /usr/bin/cc
[INFO] [stderr]   -- Check for working C compiler: /usr/bin/cc -- works
[INFO] [stderr]   -- Detecting C compiler ABI info
[INFO] [stderr]   -- Detecting C compiler ABI info - done
[INFO] [stderr]   -- Detecting C compile features
[INFO] [stderr]   -- Detecting C compile features - done
[INFO] [stderr]   -- Check for working CXX compiler: /usr/bin/c++
[INFO] [stderr]   -- Check for working CXX compiler: /usr/bin/c++ -- works
[INFO] [stderr]   -- Detecting CXX compiler ABI info
[INFO] [stderr]   -- Detecting CXX compiler ABI info - done
[INFO] [stderr]   -- Detecting CXX compile features
[INFO] [stderr]   -- Detecting CXX compile features - done
[INFO] [stderr]   -- Configuring incomplete, errors occurred!
[INFO] [stderr]   See also "/opt/rustwide/target/debug/build/openmm-sys-da2de88865722704/out/build/CMakeFiles/CMakeOutput.log".
[INFO] [stderr] 
[INFO] [stderr]   --- stderr
[INFO] [stderr]   fatal: not a git repository (or any parent up to mount point /opt/rustwide)
[INFO] [stderr]   Stopping at filesystem boundary (GIT_DISCOVERY_ACROSS_FILESYSTEM not set).
[INFO] [stderr]   CMake Deprecation Warning at CMakeLists.txt:25 (CMAKE_POLICY):
[INFO] [stderr]     The OLD behavior for policy CMP0042 will be removed from a future version
[INFO] [stderr]     of CMake.
[INFO] [stderr] 
[INFO] [stderr]     The cmake-policies(7) manual explains that the OLD behaviors of all
[INFO] [stderr]     policies are deprecated and that a policy should be set to OLD only under
[INFO] [stderr]     specific short-term circumstances.  Projects should be ported to the NEW
[INFO] [stderr]     behavior and not rely on setting a policy to OLD.
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   CMake Error at /usr/share/cmake-3.16/Modules/FindPackageHandleStandardArgs.cmake:146 (message):
[INFO] [stderr]     Could NOT find Doxygen (missing: DOXYGEN_EXECUTABLE)
[INFO] [stderr]   Call Stack (most recent call first):
[INFO] [stderr]     /usr/share/cmake-3.16/Modules/FindPackageHandleStandardArgs.cmake:393 (_FPHSA_FAILURE_MESSAGE)
[INFO] [stderr]     /usr/share/cmake-3.16/Modules/FindDoxygen.cmake:633 (find_package_handle_standard_args)
[INFO] [stderr]     wrappers/CMakeLists.txt:1 (find_package)
[INFO] [stderr] 
[INFO] [stderr] 
[INFO] [stderr]   thread 'main' panicked at '
[INFO] [stderr]   command did not execute successfully, got: exit code: 1
[INFO] [stderr] 
[INFO] [stderr]   build script failed, must exit now', /opt/rustwide/cargo-home/registry/src/github.com-1ecc6299db9ec823/cmake-0.1.44/src/lib.rs:885:5
[INFO] [stderr]   stack backtrace:
[INFO] [stderr]      0:     0x5568690f8035 - backtrace::backtrace::libunwind::trace::h5e2646fa3eddf2ea
[INFO] [stderr]                                  at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/libunwind.rs:86
[INFO] [stderr]      1:     0x5568690f8035 - backtrace::backtrace::trace_unsynchronized::hb95dd7f77ce47877
[INFO] [stderr]                                  at /cargo/registry/src/github.com-1ecc6299db9ec823/backtrace-0.3.46/src/backtrace/mod.rs:66
[INFO] [stderr]      2:     0x5568690f8035 - std::sys_common::backtrace::_print_fmt::h5e71b67af43fd70d
[INFO] [stderr]                                  at src/libstd/sys_common/backtrace.rs:78
[INFO] [stderr]      3:     0x5568690f8035 - <std::sys_common::backtrace::_print::DisplayBacktrace as core::fmt::Display>::fmt::hdb4a83d2b61107e5
[INFO] [stderr]                                  at src/libstd/sys_common/backtrace.rs:59
[INFO] [stderr]      4:     0x55686911ce5c - core::fmt::write::ha20e7262fa3e8a7a
[INFO] [stderr]                                  at src/libcore/fmt/mod.rs:1076
[INFO] [stderr]      5:     0x5568690f4682 - std::io::Write::write_fmt::h1aebfe8a5a79e36d
[INFO] [stderr]                                  at src/libstd/io/mod.rs:1537
[INFO] [stderr]      6:     0x5568690faae0 - std::sys_common::backtrace::_print::h9c07314cc66ba539
[INFO] [stderr]                                  at src/libstd/sys_common/backtrace.rs:62
[INFO] [stderr]      7:     0x5568690faae0 - std::sys_common::backtrace::print::hd1fd65f49a2d8544
[INFO] [stderr]                                  at src/libstd/sys_common/backtrace.rs:49
[INFO] [stderr]      8:     0x5568690faae0 - std::panicking::default_hook::{{closure}}::h222da46485ab36fc
[INFO] [stderr]                                  at src/libstd/panicking.rs:198
[INFO] [stderr]      9:     0x5568690fa82c - std::panicking::default_hook::hc5868949d129ed00
[INFO] [stderr]                                  at src/libstd/panicking.rs:217
[INFO] [stderr]     10:     0x5568690fb123 - std::panicking::rust_panic_with_hook::h26a6ab8b0993c0c8
[INFO] [stderr]                                  at src/libstd/panicking.rs:526
[INFO] [stderr]     11:     0x5568690fad1b - rust_begin_unwind
[INFO] [stderr]                                  at src/libstd/panicking.rs:437
[INFO] [stderr]     12:     0x5568690fac8b - std::panicking::begin_panic_fmt::h2ff295231415d4a6
[INFO] [stderr]                                  at src/libstd/panicking.rs:391
[INFO] [stderr]     13:     0x5568690d00b7 - cmake::fail::hadbd8ff86e323429
[INFO] [stderr]     14:     0x5568690cfcbe - cmake::run::h19f6d3ab5f14425c
[INFO] [stderr]     15:     0x5568690cdc75 - cmake::Config::build::h6aa6e705e9d8a4c9
[INFO] [stderr]     16:     0x5568690c7d88 - build_script_build::main::he3e12531d8b00ea9
[INFO] [stderr]     17:     0x5568690c8983 - std::rt::lang_start::{{closure}}::h5235a5b938215f42
[INFO] [stderr]     18:     0x5568690fb4f3 - std::rt::lang_start_internal::{{closure}}::h84a998219831fa70
[INFO] [stderr]                                  at src/libstd/rt.rs:52
[INFO] [stderr]     19:     0x5568690fb4f3 - std::panicking::try::do_call::he8e1d689a3e26def
[INFO] [stderr]                                  at src/libstd/panicking.rs:348
[INFO] [stderr]     20:     0x5568690fb4f3 - std::panicking::try::h264b6eebc2fa7bbf
[INFO] [stderr]                                  at src/libstd/panicking.rs:325
[INFO] [stderr]     21:     0x5568690fb4f3 - std::panic::catch_unwind::hbf28fafa723b2128
[INFO] [stderr]                                  at src/libstd/panic.rs:394
[INFO] [stderr]     22:     0x5568690fb4f3 - std::rt::lang_start_internal::he959aa59bc3ec202
[INFO] [stderr]                                  at src/libstd/rt.rs:51
[INFO] [stderr]     23:     0x5568690c8752 - main
[INFO] [stderr]     24:     0x7fbc5f6b30b3 - __libc_start_main
[INFO] [stderr]     25:     0x5568690c51ae - _start
[INFO] [stderr]     26:                0x0 - <unknown>
[INFO] running `Command { std: "docker" "inspect" "a38b06bc223c26c0535ad3b499c49994c41800932220a30e491d0763a7807155", kill_on_drop: false }`
[INFO] running `Command { std: "docker" "rm" "-f" "a38b06bc223c26c0535ad3b499c49994c41800932220a30e491d0763a7807155", kill_on_drop: false }`
[INFO] [stdout] a38b06bc223c26c0535ad3b499c49994c41800932220a30e491d0763a7807155
